Pimm – Partial immortalization

A Biotech Geek (micro)Blogger’s adventures through science, technology and the web…

  • email me

    [attilacsordas][at][gmail.com]
  • Attila on Twitter

  • Recent Comments

    Denise on Maximum Life CEO David Kekich:…
    goalranks on What does a good laboratory ho…
    goalranks on Google’s Palimpsest proj…
    sportza on Google’s Palimpsest proj…
    Campthree on How to read PDF files on iPhon…
    ezDigg on Are life extensionists mainly …
    ezDigg on 23andMe’s mission: conne…
    ezDigg on Google Health, IBM: real-time,…
    MAstork on Rumors on Amatokin: a skin ste…
    Bash on Are there any mitochondria in …
  • licence

    Creative Commons License
  • c

  •  

    May 2009
    M T W T F S S
    « Apr   Sep »
     123
    45678910
    11121314151617
    18192021222324
    25262728293031

Archive for May, 2009

Mapping neurons without glial cells ~ SNP genotyping w/o whole sequencing?

Posted by attilachordash on May 3, 2009

Nature’s Journal Club column is usually a good & always a short read providing exciting angles on scientific topics/papers from good researchers. Recently ‘neuroscientist’ Dave Featherstone argued for a broader approach to brain mapping by not restricting it only to the connectome between neurons. Neurons are making up less than 10% of the human brain while most brains cells are glia neglected by scientists making the wiring diagram of a ‘complete’ human brain.

For example, consider the recent study of adenosine and sleep led by Philip Haydon and Marcos Frank at the University of Pennsylvania in Philadelphia (M. M. Halassa et al. Neuron 61, 213–219; 2009). Adenosine binds to receptors on neurons, thereby regulating neuronal signalling. Interestingly, adenosine seems to represent ’sleepiness’: it accumulates during wakefulness and dissipates during sleep. Where does it come from? It is generated from adenosine triphosphate (ATP), which is secreted by astrocytes — a major type of glia.
Therefore, if we want to map the functional brain connections controlling sleep, we need to include glia and the extracellular space between glia and neurons. If we’re going to understand brain function by mapping the brain, we need to include most of the brain in our map.

I tried to draw an analogy between the situation in brain mapping and personal genomics on FriendFeed:

brainmappinganalogy

Update: it seems Dave Featherstone had something similar in mind as an analogy, he answered my email the following way:

Yeah, that’s a good analogy. The original version of my column said the connectome would be like if the human genome had only sequenced exons. But that sentence was cut for space considerations.

Posted in Nature, biology, genomics, neural, personalized genomics, science | Leave a Comment »